miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90220612|gb|BX269565.4|BX269565 GTGAGCCGGGTCCTGTGTAGCTCTCCAGCCCCCAGGTACCTGGGGCGCCCGAGGGCTGAGCAGACAGTGCTGGTGAGACC
CCCCTTCCTGCGGCCCGAGGTGTCAGATGGCCAAATCACTGTCAAGATCATGGACAACGGTATCCAGACAGAGCTGAAGA
GGACGAAGTCCAAAGGAAGCCTGGAGGTGACGGAGAGCCAGTCTGCTGATGCCGAACCGCCACCCCCACCTAAGCCAGAC
CTCAGCCGCTACACGGGCCTGAGGACACACTTAACCCTGGCCACCAATGAGGACAGCAGCTTGCTAGGCAAGGACAGCCC
CCCGACACCCACCATGTACAAGTACCGGCCTGGATACAGCAGCAGCAGCAGCTCAGCTGCCCTGCCCCATTCCACCAGCG
CCAAGCTGAGCCGAGTGAACAGCCTGAAGGAGCCCAACTCCATCGGCGAG




Most similar to sp|Q8VDZ4|ZDHC5_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8VDZ4|ZDHC5_MOUSE Probable palmitoyltransferase ZDHHC5 OS=Mus
           musculus GN=Zdhhc5 PE=1 SV=1
          Length = 715

 Score =  224 bits (571), Expect = 2e-58
 Identities = 113/150 (75%), Positives = 123/150 (82%)
 Frame = +1

Query: 1   VSRVLCSSPAPRYLGRPRAEQTVLVRPPFLRPEVSDGQITVKIMDNGIQTELKRTKSKGS 180
           VSRVLCSSPAPRYLGRP+ E+T+++RPPFLRPEVSDGQITVKIMDNGIQ EL+RTKSKGS
Sbjct: 240 VSRVLCSSPAPRYLGRPKKEKTIVIRPPFLRPEVSDGQITVKIMDNGIQGELRRTKSKGS 299

Query: 181 LEVTESQSADAEXXXXXXXDLSRYTGLRTHLTLATNEDSSLLGKDSPPTPTMYKYRPGYX 360
           LE+TESQSADAE       DLSRYTGLRTHL+LATNEDSSLLGKDSPPTPTMYKYRPGY 
Sbjct: 300 LEITESQSADAEPPPPPKPDLSRYTGLRTHLSLATNEDSSLLGKDSPPTPTMYKYRPGYS 359

Query: 361 XXXXXXXXXXXXXXKLSRVNSLKEPNSIGE 450
                         KLSR +SLKEP SI +
Sbjct: 360 SSSTSAAMPHSSSAKLSRGDSLKEPTSIAD 389